Gems
binya 0.0.2
A small library to extract FOMC public speeches
7,944 Downloads
binyo 0.0.2
binyo offers a generic C API for dealing with Ruby IO objects and extension classes tha...
31,780 Downloads
bio 2.0.5
BioRuby is a library for bioinformatics (biology + information science).
717,835 Downloads
bio-affy 0.5.1
Affymetrix microarray file format parser (CEL/CDF) for Ruby. FFI binding to Biolib po...
12,100 Downloads
bio-alignment 0.1.0
Support for multiple sequence alignments (MSA)
36,412 Downloads
bio-aliphatic_index 0.0.1
A simple biogem that allows computation of the aliphatic index of a protein
5,252 Downloads
bio-assembly 0.1.0
bioruby plugin to parse, write, and manipulate assembly data
19,186 Downloads
bio-band 0.1.11
Data mining and machine learning algorithms for JRuby
38,052 Downloads
bio-basespace-sdk 0.1.7
BaseSpace Ruby SDK is a Ruby based Software Development Kit to be used in the developme...
41,918 Downloads
bio-bgzf 0.2.1
This library provides support for BGZF (Blocked GZip Format) in Ruby. BGZF, originally ...
55,668 Downloads
bio-bigbio 0.1.6
Fasta reader, ORF emitter, sequence translation
25,261 Downloads
bio-bigwig 0.0.6
This is a Ruby binding for libBigWig (https://github.com/dpryan79/libBigWig), which pro...
2,067 Downloads
bio-biolinux 0.1.0
Meta package for BioLinux distribution: bio-core, bio-core-ext
5,379 Downloads
bio-biosql 0.0.0
Provides BioSQL support for BioRuby.
3,019 Downloads
bio-biostars-analytics 0.2.0
Ruby script for data-mining biostars.org using web-crawling techniques as well as utili...
10,308 Downloads
bio-blast_seq_extract 0.2.5
Extract the sequence of the subjects' region based on blast search.
5,080 Downloads
bio-blastxmlparser 2.0.4
Fast big data BLAST XML parser and library; this libxml2 based version is 50x faster th...
51,272 Downloads
bio-blast-xmlparser 0.0.0
BioRuby BLAST XMLParser plugin: a plugin of BioRuby BLAST XML result parser by using th...
2,931 Downloads
bio-blat-tools 0.1.0
Tools to manipulate blat files from the command line. Uses the Bio::Blat object from Bi...
3,959 Downloads
bio-bwa 0.2.2
Ruby binding for BWA mapping software, built using Ruby-FFI library
14,186 Downloads
bio-cd-hit-report 0.1.0
A Ruby library for reading CD-HIT cluster reports
16,447 Downloads
biocgem 0.0.3
biocgem command line tools
4,003 Downloads
bio-cgranges 0.0.4
Genomic interval overlap queries
3,031 Downloads
bio-chembl 0.1.3
BioRuby plugin for ChEMBL REST API Client, Parser and Container classes
12,692 Downloads
bio-cigar 0.1.0
A parser for CIGAR format alignments.
7,363 Downloads
bio-cnls_screenscraper 0.3.0
Programmatic interface to the cNLS nuclear localisation signal prediction software
9,402 Downloads
bio-commandeer 0.4.0
A dead simple method of running shell commands from within Ruby, by applying opinion
23,170 Downloads
bio-conduit 1.0.0
A pipeline creator for bioruby
3,549 Downloads
bio-core 0.0.1
Bioruby core plugins
9,655 Downloads
bio-core-ext 0.0.1
BioRuby plugins with dependecies from external library or tools
5,379 Downloads