Gems
bio-cgranges 0.0.4
Genomic interval overlap queries
3,144 Downloads
bio-chembl 0.1.3
BioRuby plugin for ChEMBL REST API Client, Parser and Container classes
12,761 Downloads
bio-cigar 0.1.0
A parser for CIGAR format alignments.
7,410 Downloads
bio-cnls_screenscraper 0.3.0
Programmatic interface to the cNLS nuclear localisation signal prediction software
9,449 Downloads
bio-commandeer 0.4.0
A dead simple method of running shell commands from within Ruby, by applying opinion
23,515 Downloads
bio-conduit 1.0.0
A pipeline creator for bioruby
3,580 Downloads
bio-core 0.0.1
Bioruby core plugins
9,704 Downloads
bio-core-ext 0.0.1
BioRuby plugins with dependecies from external library or tools
5,407 Downloads
bio-data-restriction_enzyme 1.109.0
Restriction Enzyme Dataset from REBASE in yaml form
5,392 Downloads
bio-dbla-classifier 0.7.1
Methods to classify and manipulate PfEMP1 DBL-alpha sequence tags
25,612 Downloads
bio-dbsnp 0.1.1
decoding the dbSNP bitfield containg detaild information
5,326 Downloads
biodiversity 6.0.1
Parsing tool for biodiversity informatics
231,406 Downloads
biodiversity19 3.1.7
Tools for biodiversity informatics
203,306 Downloads
BioDSL 1.0.2
BioDSL is a Bioinformatics Domain Specific Language.
8,657 Downloads
bio-emboss_six_frame_nucleotide_sequences 0.1.0
a method to get the nucleotide sequence of translations done by the EMBOSS bioinformati...
5,628 Downloads
bio-ensembl 1.1.0
This API provides a complete set of methods and classes to access the Ensembl database ...
5,374 Downloads
bio-ensembl-rest 0.2.0
A Ruby library for the RESTful Ensembl API.
7,912 Downloads
bio-executables 1.0.0
BioRuby executables is a collection of miscellaneous utilities for bioinformatics that ...
5,763 Downloads
bio-exominer 0.0.3
Parse publications for gene names in a fuzzy fashion
4,202 Downloads
bio-exportpred 0.0.1
Wrapper around the ExportPred algorithm for predicting P. falciparum exported proteins....
5,255 Downloads
bio-express_beta_diversity 0.1.0
Interface for express beta diversity file formats
7,577 Downloads
bio-faidx 0.0.1
ools to work with fasta files, indexed with samtools. The initial releases depend on bi...
4,038 Downloads
bio-fasta_retrieve 0.0.7
Gem that helps to retrieve DNA sequence from UCSC
20,937 Downloads
bio-faster 0.4.5
A fast parser for FastQ files
30,241 Downloads
bio-fastqc 0.10.8
ruby parser for FastQC, a quality control software for high-throughput sequencing data.
60,864 Downloads
bio-foo 0.0.0
longer description of your gem
5,268 Downloads
bio-freebayes 0.1.6
The API for Freebayes version #{Bio::Freebayes::EXTVERSION}
6,362 Downloads
bio-gadget 0.5.0
Gadgets for bioinformatics
83,123 Downloads
bio-gag 0.1.0
bio-gag is a biogem for detecting and correcting a particular type of error that occurs...
8,970 Downloads
bio-gem 1.3.6
Biogem is a software generator for those bioinformaticans who want to start coding an a...
97,201 Downloads