Gems
bio-data-restriction_enzyme 1.109.0
Restriction Enzyme Dataset from REBASE in yaml form
5,362 Downloads
bio-dbla-classifier 0.7.1
Methods to classify and manipulate PfEMP1 DBL-alpha sequence tags
25,492 Downloads
bio-dbsnp 0.1.1
decoding the dbSNP bitfield containg detaild information
5,298 Downloads
biodiversity 6.0.0
Parsing tool for biodiversity informatics
229,550 Downloads
biodiversity19 3.1.7
Tools for biodiversity informatics
202,349 Downloads
BioDSL 1.0.2
BioDSL is a Bioinformatics Domain Specific Language.
8,584 Downloads
bio-emboss_six_frame_nucleotide_sequences 0.1.0
a method to get the nucleotide sequence of translations done by the EMBOSS bioinformati...
5,599 Downloads
bio-ensembl 1.1.0
This API provides a complete set of methods and classes to access the Ensembl database ...
5,346 Downloads
bio-ensembl-rest 0.2.0
A Ruby library for the RESTful Ensembl API.
7,858 Downloads
bio-executables 1.0.0
BioRuby executables is a collection of miscellaneous utilities for bioinformatics that ...
5,680 Downloads
bio-exominer 0.0.3
Parse publications for gene names in a fuzzy fashion
4,174 Downloads
bio-exportpred 0.0.1
Wrapper around the ExportPred algorithm for predicting P. falciparum exported proteins....
5,228 Downloads
bio-express_beta_diversity 0.1.0
Interface for express beta diversity file formats
7,531 Downloads
bio-faidx 0.0.1
ools to work with fasta files, indexed with samtools. The initial releases depend on bi...
4,011 Downloads
bio-fasta_retrieve 0.0.7
Gem that helps to retrieve DNA sequence from UCSC
20,798 Downloads
bio-faster 0.4.5
A fast parser for FastQ files
30,083 Downloads
bio-fastqc 0.10.8
ruby parser for FastQC, a quality control software for high-throughput sequencing data.
60,328 Downloads
bio-foo 0.0.0
longer description of your gem
5,240 Downloads
bio-freebayes 0.1.6
The API for Freebayes version #{Bio::Freebayes::EXTVERSION}
6,310 Downloads
bio-gadget 0.5.0
Gadgets for bioinformatics
82,662 Downloads
bio-gag 0.1.0
bio-gag is a biogem for detecting and correcting a particular type of error that occurs...
8,922 Downloads
bio-gem 1.3.6
Biogem is a software generator for those bioinformaticans who want to start coding an a...
96,754 Downloads
bio-gemma-wrapper 0.99.7
GEMMA wrapper adds LOCO and permutation support. Also runs in parallel and caches K bet...
21,218 Downloads
bio-genomic-interval 0.1.2
a BioRuby plugin: handling genomic intervals,such as "chr1:123-456", and overlap state ...
16,026 Downloads
bio-gfastqc 0.0.4
Bioinformatics. Aggregate FastQC (quality control for Next Generation Sequencing -NGS-)...
6,397 Downloads
bio-gff3 0.9.1
GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low me...
45,063 Downloads
bio-gff3-pltools 0.3.0
Ruby wrapper for the gff3-pltools.
12,882 Downloads
bio-gggenome 0.2.0
A Ruby client for GGGenome the Ultrafast sequence search
7,904 Downloads
bio-gngm 0.2.1
Identify causative mutations in a model genome from NGS reads using the NGM method.
13,209 Downloads
biographer 0.1.0
A gem that creates a personal static website for software developers that showcases the...
3,259 Downloads