Gems
bio-cd-hit-report 0.1.0
A Ruby library for reading CD-HIT cluster reports
16,840 Downloads
biocgem 0.0.3
biocgem command line tools
4,265 Downloads
bio-cgranges 0.0.4
Genomic interval overlap queries
3,529 Downloads
bio-chembl 0.1.3
BioRuby plugin for ChEMBL REST API Client, Parser and Container classes
12,995 Downloads
bio-cigar 0.1.0
A parser for CIGAR format alignments.
7,610 Downloads
bio-cnls_screenscraper 0.3.0
Programmatic interface to the cNLS nuclear localisation signal prediction software
9,636 Downloads
bio-commandeer 0.4.0
A dead simple method of running shell commands from within Ruby, by applying opinion
24,222 Downloads
bio-conduit 1.0.0
A pipeline creator for bioruby
3,721 Downloads
bio-core 0.0.1
Bioruby core plugins
9,908 Downloads
bio-core-ext 0.0.1
BioRuby plugins with dependecies from external library or tools
5,541 Downloads
bio-data-restriction_enzyme 1.109.0
Restriction Enzyme Dataset from REBASE in yaml form
5,522 Downloads
bio-dbla-classifier 0.7.1
Methods to classify and manipulate PfEMP1 DBL-alpha sequence tags
26,004 Downloads
bio-dbsnp 0.1.1
decoding the dbSNP bitfield containg detaild information
5,455 Downloads
biodiversity 6.0.1
Parsing tool for biodiversity informatics
238,391 Downloads
biodiversity19 3.1.7
Tools for biodiversity informatics
206,190 Downloads
BioDSL 1.0.2
BioDSL is a Bioinformatics Domain Specific Language.
8,899 Downloads
bio-emboss_six_frame_nucleotide_sequences 0.1.0
a method to get the nucleotide sequence of translations done by the EMBOSS bioinformati...
5,791 Downloads
bio-ensembl 1.1.0
This API provides a complete set of methods and classes to access the Ensembl database ...
5,501 Downloads
bio-ensembl-rest 0.2.0
A Ruby library for the RESTful Ensembl API.
8,093 Downloads
bio-executables 1.0.0
BioRuby executables is a collection of miscellaneous utilities for bioinformatics that ...
6,032 Downloads
bio-exominer 0.0.3
Parse publications for gene names in a fuzzy fashion
4,326 Downloads
bio-exportpred 0.0.1
Wrapper around the ExportPred algorithm for predicting P. falciparum exported proteins....
5,377 Downloads
bio-express_beta_diversity 0.1.0
Interface for express beta diversity file formats
7,760 Downloads
bio-faidx 0.0.1
ools to work with fasta files, indexed with samtools. The initial releases depend on bi...
4,173 Downloads
bio-fasta_retrieve 0.0.7
Gem that helps to retrieve DNA sequence from UCSC
21,348 Downloads
bio-faster 0.4.5
A fast parser for FastQ files
30,694 Downloads
bio-fastqc 0.10.8
ruby parser for FastQC, a quality control software for high-throughput sequencing data.
62,585 Downloads
bio-foo 0.0.0
longer description of your gem
5,372 Downloads
bio-freebayes 0.1.6
The API for Freebayes version #{Bio::Freebayes::EXTVERSION}
6,573 Downloads
bio-gadget 0.5.0
Gadgets for bioinformatics
84,383 Downloads