Gems
bio-exominer 0.0.3
Parse publications for gene names in a fuzzy fashion
4,555 Downloads
bio-exportpred 0.0.1
Wrapper around the ExportPred algorithm for predicting P. falciparum exported proteins....
5,644 Downloads
bio-express_beta_diversity 0.1.0
Interface for express beta diversity file formats
8,028 Downloads
bio-faidx 0.0.1
ools to work with fasta files, indexed with samtools. The initial releases depend on bi...
4,365 Downloads
bio-fasta_retrieve 0.0.7
Gem that helps to retrieve DNA sequence from UCSC
21,893 Downloads
bio-faster 0.4.5
A fast parser for FastQ files
31,624 Downloads
bio-fastqc 0.10.8
ruby parser for FastQC, a quality control software for high-throughput sequencing data.
64,330 Downloads
bio-foo 0.0.0
longer description of your gem
5,579 Downloads
bio-freebayes 0.1.6
The API for Freebayes version #{Bio::Freebayes::EXTVERSION}
7,006 Downloads
bio-gadget 0.5.0
Gadgets for bioinformatics
86,479 Downloads
bio-gag 0.1.0
bio-gag is a biogem for detecting and correcting a particular type of error that occurs...
9,459 Downloads
bio-gem 1.3.6
Biogem is a software generator for those bioinformaticans who want to start coding an a...
101,167 Downloads
bio-gemma-wrapper 0.99.7
GEMMA wrapper adds LOCO and permutation support. Also runs in parallel and caches K bet...
23,398 Downloads
bio-genomic-interval 0.1.2
a BioRuby plugin: handling genomic intervals,such as "chr1:123-456", and overlap state ...
17,260 Downloads
bio-gfastqc 0.0.4
Bioinformatics. Aggregate FastQC (quality control for Next Generation Sequencing -NGS-)...
6,945 Downloads
bio-gff3 0.9.1
GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low me...
47,153 Downloads
bio-gff3-pltools 0.3.0
Ruby wrapper for the gff3-pltools.
13,392 Downloads
bio-gggenome 0.2.0
A Ruby client for GGGenome the Ultrafast sequence search
8,433 Downloads
bio-gngm 0.2.1
Identify causative mutations in a model genome from NGS reads using the NGM method.
13,932 Downloads
biographer 0.1.0
A gem that creates a personal static website for software developers that showcases the...
3,447 Downloads
bio-graphics 1.4
Library for visualizing genomic regions
16,358 Downloads
bio-grid 0.3.3
A BioGem to submit jobs on a queue system
48,955 Downloads
bio-hello 0.0.0
Encode any message string into a DNA sequence
6,027 Downloads
bio-hmmer3_report 0.1.0
Enables programmatic parsing of HMMER version 3 reports
8,703 Downloads
bio-hmmer_model 0.0.2
Parse PFAM HMM definition files so that the models can be accessible programmatically
9,520 Downloads
bio-hydropathy 0.0.1
Hydropathy scale for BioRuby
5,655 Downloads
bio-img_metadata 0.0.1
Reads metadata from Integrated Microbial Genomes (IMG) metadata files into a programmat...
5,228 Downloads
bio-incanter 0.1.0
A Jruby wrapper to Incanter lib
5,517 Downloads
bioinform 0.3.1
A bunch of useful classes for bioinformatics
86,719 Downloads
biointerchange 1.0.8
BioInterchange is a Ruby gem, command-line tool, web-service for turning heterogeneous ...
49,954 Downloads