Gems
biodiversity 6.0.1
Parsing tool for biodiversity informatics
262,656 Downloads
biodiversity19 3.1.7
Tools for biodiversity informatics
214,679 Downloads
BioDSL 1.0.2
BioDSL is a Bioinformatics Domain Specific Language.
10,117 Downloads
bio-emboss_six_frame_nucleotide_sequences 0.1.0
a method to get the nucleotide sequence of translations done by the EMBOSS bioinformati...
6,069 Downloads
bio-ensembl 1.1.0
This API provides a complete set of methods and classes to access the Ensembl database ...
5,887 Downloads
bio-ensembl-rest 0.2.0
A Ruby library for the RESTful Ensembl API.
8,552 Downloads
bio-executables 1.0.0
BioRuby executables is a collection of miscellaneous utilities for bioinformatics that ...
6,820 Downloads
bio-exominer 0.0.3
Parse publications for gene names in a fuzzy fashion
4,778 Downloads
bio-exportpred 0.0.1
Wrapper around the ExportPred algorithm for predicting P. falciparum exported proteins....
6,012 Downloads
bio-express_beta_diversity 0.1.0
Interface for express beta diversity file formats
8,245 Downloads
bio-faidx 0.0.1
ools to work with fasta files, indexed with samtools. The initial releases depend on bi...
4,507 Downloads
bio-fasta_retrieve 0.0.7
Gem that helps to retrieve DNA sequence from UCSC
22,310 Downloads
bio-faster 0.4.5
A fast parser for FastQ files
32,308 Downloads
bio-fastqc 0.10.8
ruby parser for FastQC, a quality control software for high-throughput sequencing data.
66,294 Downloads
bio-foo 0.0.0
longer description of your gem
5,719 Downloads
bio-freebayes 0.1.6
The API for Freebayes version #{Bio::Freebayes::EXTVERSION}
7,302 Downloads
bio-gadget 0.5.0
Gadgets for bioinformatics
88,407 Downloads
bio-gag 0.1.0
bio-gag is a biogem for detecting and correcting a particular type of error that occurs...
9,727 Downloads
bio-gem 1.3.6
Biogem is a software generator for those bioinformaticans who want to start coding an a...
102,758 Downloads
bio-gemma-wrapper 0.99.7
GEMMA wrapper adds LOCO and permutation support. Also runs in parallel and caches K bet...
24,597 Downloads
bio-genomic-interval 0.1.2
a BioRuby plugin: handling genomic intervals,such as "chr1:123-456", and overlap state ...
17,856 Downloads
bio-gfastqc 0.0.4
Bioinformatics. Aggregate FastQC (quality control for Next Generation Sequencing -NGS-)...
7,169 Downloads
bio-gff3 0.9.1
GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low me...
48,286 Downloads
bio-gff3-pltools 0.3.0
Ruby wrapper for the gff3-pltools.
13,574 Downloads
bio-gggenome 0.2.0
A Ruby client for GGGenome the Ultrafast sequence search
8,654 Downloads
bio-gngm 0.2.1
Identify causative mutations in a model genome from NGS reads using the NGM method.
14,281 Downloads
biographer 0.1.0
A gem that creates a personal static website for software developers that showcases the...
3,508 Downloads
bio-graphics 1.4
Library for visualizing genomic regions
16,752 Downloads
bio-grid 0.3.3
A BioGem to submit jobs on a queue system
49,808 Downloads
bio-hello 0.0.0
Encode any message string into a DNA sequence
6,177 Downloads